ContextProfileDB Class Reference

#include <hmm_pseudo_counts.hh>

Public Member Functions
	ContextProfileDB ()
void	Save (const String &filename) const
void	AddProfile (const ContextProfile &profile)
const ContextProfile &	operator[] (int idx) const
const ContextProfile &	at (int idx) const
size_t	size () const
size_t	profile_length () const

Static Public Member Functions
static ContextProfileDBPtr	Load (const String &filename)
static ContextProfileDBPtr	FromCRF (const String &filename)

Detailed Description

Definition at line 115 of file hmm_pseudo_counts.hh.

Constructor & Destructor Documentation

ContextProfileDB()

ContextProfileDB ( )

inline

Definition at line 119 of file hmm_pseudo_counts.hh.

Member Function Documentation

AddProfile()

void AddProfile ( const ContextProfile &  profile )

inline

Definition at line 127 of file hmm_pseudo_counts.hh.

at()

const ContextProfile& at ( int  idx ) const

inline

Definition at line 142 of file hmm_pseudo_counts.hh.

FromCRF()

static ContextProfileDBPtr FromCRF ( const String &  filename )

static

Load()

static ContextProfileDBPtr Load ( const String &  filename )

static

operator[]()

const ContextProfile& operator[] ( int  idx ) const

inline

Definition at line 138 of file hmm_pseudo_counts.hh.

profile_length()

size_t profile_length ( ) const

inline

Definition at line 150 of file hmm_pseudo_counts.hh.

Save()

void Save

(

const String &

filename

)

const

size()

size_t size ( ) const

inline

Definition at line 146 of file hmm_pseudo_counts.hh.

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The documentation for this class was generated from the following file:

• build-dev-doc/stage/include/ost/seq/alg/hmm_pseudo_counts.hh