Public Member Functions
def	__init__ (self, rmsd_common, tm_score, max_sub, gdt_ts, gdt_ha, rmsd_below_five, transform)

Data Fields
	rmsd_common

	tm_score

	max_sub

	gdt_ts

	gdt_ha

	rmsd_below_five

	transform

Detailed Description

Holds the result of running TMscore

.. attribute:: rmsd_common
  
  The RMSD of the common Calpha atoms of both structures

.. attribute:: rmsd_below_five

  The RMSD of all Calpha atoms that can be superposed below five Angstroem
  
.. attribute:: tm_score

  The TM-score of the structural superposition

.. attribute:: transform

  The transform that superposes the model onto the reference structure.
  
  :type: :class:`~ost.geom.Mat4`

.. attribute:: gdt_ha

  The GDT_HA of the model to the reference structure.

.. attribute:: gdt_ts

  The GDT_TS of the model to the reference structure.

Definition at line 202 of file tmtools.py.

Constructor & Destructor Documentation

◆ init()

def __init__	(	self,
		rmsd_common,
		tm_score,
		max_sub,
		gdt_ts,
		gdt_ha,
		rmsd_below_five,
		transform
	)

Definition at line 233 of file tmtools.py.

Field Documentation

◆ gdt_ha

gdt_ha

Definition at line 239 of file tmtools.py.

◆ gdt_ts

gdt_ts

Definition at line 238 of file tmtools.py.

◆ max_sub

max_sub

Definition at line 237 of file tmtools.py.

◆ rmsd_below_five

rmsd_below_five

Definition at line 240 of file tmtools.py.

◆ rmsd_common

rmsd_common

Definition at line 235 of file tmtools.py.

◆ tm_score

tm_score

Definition at line 236 of file tmtools.py.

◆ transform

transform

Definition at line 241 of file tmtools.py.

The documentation for this class was generated from the following file:

build-dev-doc/stage/lib64/python3.9/site-packages/ost/bindings/tmtools.py

Public Member Functions

Data Fields