OpenStructure
surface_impl.hh
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1 //------------------------------------------------------------------------------
2 // This file is part of the OpenStructure project <www.openstructure.org>
3 //
4 // Copyright (C) 2008-2020 by the OpenStructure authors
5 //
6 // This library is free software; you can redistribute it and/or modify it under
7 // the terms of the GNU Lesser General Public License as published by the Free
8 // Software Foundation; either version 3.0 of the License, or (at your option)
9 // any later version.
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18 //------------------------------------------------------------------------------
19 #ifndef OST_SURFACE_IMPL_HH
20 #define OST_SURFACE_IMPL_HH
21 
22 #include <vector>
23 
24 #include <ost/mol/surface_prop.hh>
26 
27 #include "surface_impl_fw.hh"
28 
29 namespace ost { namespace mol { namespace impl {
30 
33 
36 
37  typedef std::vector<SurfaceVertex> VertexList;
38  typedef std::vector<SurfaceTri> FaceList;
39 
40 public:
42 
45 
46  void Attach(const EntityHandle& eh, Real cutoff);
47  void Attach(const EntityView& ev, Real cutoff);
48 
51 
53  const SurfaceTri& Tri(SurfaceTriID id) const;
54 
55  std::vector<SurfaceVertexID> GetVertexIDList() const;
56  std::vector<SurfaceVertexID> GetTriIDList() const;
57 
59 
60  void Invert();
61 
62 private:
63  VertexList vertex_list_;
64  FaceList face_list_;
65 
66  SpatialSurfaceVertexOrganizer vertex_organizer_;
67 
68  std::vector<SurfaceVertexID> vertex_id_list_;
69  std::vector<SurfaceTriID> tri_id_list_;
70 };
71 
72 }}} // ns
73 
74 #endif
Three dimensional vector class, using Real precision.
Definition: vec3.hh:48
Protein or molecule.
definition of EntityView
Definition: entity_view.hh:86
SurfaceVertexList FindWithin(const geom::Vec3 &pos, Real distance)
SurfaceTri & Tri(SurfaceTriID id)
const SurfaceTri & Tri(SurfaceTriID id) const
void Attach(const EntityHandle &eh, Real cutoff)
SurfaceVertexID AddVertex(const SurfaceVertex &v)
std::vector< SurfaceVertexID > GetVertexIDList() const
SurfaceVertex & Vertex(SurfaceVertexID id)
void Attach(const EntityView &ev, Real cutoff)
std::vector< SurfaceVertexID > GetTriIDList() const
SurfaceTriID AddTri(SurfaceVertexID v0, SurfaceVertexID v1, SurfaceVertexID v2)
const SurfaceVertex & Vertex(SurfaceVertexID id) const
float Real
Definition: base.hh:44
#define DLLEXPORT_OST_MOL
SpatialOrganizer< SurfaceVertexID > SpatialSurfaceVertexOrganizer
Definition: surface_impl.hh:32
unsigned int SurfaceVertexID
Definition: surface_prop.hh:56
std::vector< SurfaceVertex > SurfaceVertexList
Definition: surface_prop.hh:65
unsigned int SurfaceTriID
Definition: surface_prop.hh:63
Definition: base.dox:1