ost.seq.alg.mat Namespace Reference

Variables
def	BLOSUM45 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM45)
def	BLOSUM62 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM62)
def	BLOSUM80 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM80)
def	BLOSUM100 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM100)
def	IDENTITY = _InitMatrix(SubstWeightMatrix.Preset.IDENTITY)
def	MATCH = _InitMatrix(SubstWeightMatrix.Preset.MATCH)
def	NUC44 = _InitMatrix(SubstWeightMatrix.Preset.NUC44)

Variable Documentation

BLOSUM100

def BLOSUM100 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM100)

Definition at line 11 of file mat.py.

BLOSUM45

def BLOSUM45 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM45)

Definition at line 8 of file mat.py.

BLOSUM62

def BLOSUM62 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM62)

Definition at line 9 of file mat.py.

BLOSUM80

def BLOSUM80 = _InitMatrix(SubstWeightMatrix.Preset.BLOSUM80)

Definition at line 10 of file mat.py.

IDENTITY

def IDENTITY = _InitMatrix(SubstWeightMatrix.Preset.IDENTITY)

Definition at line 12 of file mat.py.

MATCH

def MATCH = _InitMatrix(SubstWeightMatrix.Preset.MATCH)

Definition at line 13 of file mat.py.

NUC44

def NUC44 = _InitMatrix(SubstWeightMatrix.Preset.NUC44)

Definition at line 14 of file mat.py.