ProfileIOHandler Class Reference

#include <profile_io_handler.hh>

Inherited by HhmIOHandler, HhmIOHandler, PssmIOHandler, and PssmIOHandler.

Public Member Functions
virtual	~ProfileIOHandler ()
virtual void	Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
virtual void	ImportFromString (seq::ProfileHandle &prof, const String &data)=0
virtual void	Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0
virtual	~ProfileIOHandler ()
virtual void	Import (seq::ProfileHandle &prof, const boost::filesystem::path &loc)=0
virtual void	ImportFromString (seq::ProfileHandle &prof, const String &data)=0
virtual void	Export (const seq::ProfileHandle &prof, const boost::filesystem::path &loc) const =0

Detailed Description

pure abstract base class for profile io handlers

Definition at line 37 of file profile_io_handler.hh.

Constructor & Destructor Documentation

~ProfileIOHandler() [1/2]

virtual ~ProfileIOHandler ( )

inlinevirtual

Definition at line 39 of file profile_io_handler.hh.

~ProfileIOHandler() [2/2]

virtual ~ProfileIOHandler ( )

inlinevirtual

Definition at line 39 of file profile_io_handler.hh.

Member Function Documentation

Export() [1/2]

virtual void Export ( const seq::ProfileHandle &  prof, const boost::filesystem::path &  loc  ) const

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

Export() [2/2]

virtual void Export ( const seq::ProfileHandle &  prof, const boost::filesystem::path &  loc  ) const

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

Import() [1/2]

virtual void Import ( seq::ProfileHandle &  prof, const boost::filesystem::path &  loc  )

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

Import() [2/2]

virtual void Import ( seq::ProfileHandle &  prof, const boost::filesystem::path &  loc  )

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

ImportFromString() [1/2]

virtual void ImportFromString ( seq::ProfileHandle &  prof, const String &  data  )

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

ImportFromString() [2/2]

virtual void ImportFromString ( seq::ProfileHandle &  prof, const String &  data  )

pure virtual

Implemented in PssmIOHandler, HhmIOHandler, PssmIOHandler, and HhmIOHandler.

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The documentation for this class was generated from the following file:

• build-dev-doc/stage/include/ost/io/profile_io_handler.hh