Public Member Functions
def	__init__ (self)

Data Fields
	query

	match_columns

	n_eff

	searched_hmms

	date

	command

Detailed Description

Stats from the beginning of search output.

.. attribute:: query

  The name of the query sequence

  :type: :class:`str`

.. attribute:: match_columns

  Total of aligned Match columns

  :type: :class:`int`

.. attribute:: n_eff

  Value of the ``-neff`` option

  :type: :class:`float`

.. attribute:: searched_hmms

  Number of profiles searched

  :type: :class:`int`

.. attribute:: date

  Execution date

  :type: :class:`datetime.datetime`

.. attribute:: command

  Command used to run

  :type: :class:`str`

Definition at line 70 of file hhblits2.py.

Constructor & Destructor Documentation

◆ init()

def __init__ ( self )

Definition at line 109 of file hhblits2.py.

Field Documentation

◆ command

command

Definition at line 115 of file hhblits2.py.

◆ date

date

Definition at line 114 of file hhblits2.py.

◆ match_columns

match_columns

Definition at line 111 of file hhblits2.py.

◆ n_eff

n_eff

Definition at line 112 of file hhblits2.py.

◆ query

query

Definition at line 110 of file hhblits2.py.

◆ searched_hmms

searched_hmms

Definition at line 113 of file hhblits2.py.

The documentation for this class was generated from the following file:

build-dev-doc/stage/lib64/python3.9/site-packages/ost/bindings/hhblits2.py

Public Member Functions

Data Fields