MMCifInfoBioUnit Class Reference

#include <mmcif_info.hh>

Public Member Functions
	MMCifInfoBioUnit ()
void	Merge (MMCifInfoBioUnit &from)
void	SetID (String id)
String	GetID () const
void	SetDetails (String details)
String	GetDetails () const
void	SetMethodDetails (String method_details)
String	GetMethodDetails () const
void	AddChain (String chain)
void	SetChainList (std::vector< String > chains)
const std::vector< String > &	GetChainList () const
const std::vector< std::pair < int, int > > &	GetChainIntervalList ()
void	AddOperations (std::vector< MMCifInfoTransOpPtr > operations)
const std::vector< std::pair < int, int > > &	GetOperationsIntervalList ()
const std::vector< std::vector < MMCifInfoTransOpPtr > > &	GetOperations ()
bool	operator== (const MMCifInfoBioUnit &bu) const
bool	operator!= (const MMCifInfoBioUnit &bu) const
	MMCifInfoBioUnit ()
void	Merge (MMCifInfoBioUnit &from)
void	SetID (String id)
String	GetID () const
void	SetDetails (String details)
String	GetDetails () const
void	SetMethodDetails (String method_details)
String	GetMethodDetails () const
void	AddChain (String chain)
void	SetChainList (std::vector< String > chains)
const std::vector< String > &	GetChainList () const
const std::vector< std::pair < int, int > > &	GetChainIntervalList ()
void	AddOperations (std::vector< MMCifInfoTransOpPtr > operations)
const std::vector< std::pair < int, int > > &	GetOperationsIntervalList ()
const std::vector< std::vector < MMCifInfoTransOpPtr > > &	GetOperations ()
bool	operator== (const MMCifInfoBioUnit &bu) const
bool	operator!= (const MMCifInfoBioUnit &bu) const

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Detailed Description

Definition at line 239 of file mmcif_info.hh.

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Constructor & Destructor Documentation

MMCifInfoBioUnit ( )

inline

Create a biounit.

Definition at line 242 of file mmcif_info.hh.

MMCifInfoBioUnit ( )

inline

Create a biounit.

Definition at line 242 of file mmcif_info.hh.

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Member Function Documentation

void AddChain

(

String

chain

)

Add a chain name.

Parameters:

chain

chain name

void AddChain

(

String

chain

)

Add a chain name.

Parameters:

chain

chain name

void AddOperations

(

std::vector< MMCifInfoTransOpPtr >

operations

)

Add a set of operations.

Parameters:

operations

vector of operations to be added

void AddOperations

(

std::vector< MMCifInfoTransOpPtr >

operations

)

Add a set of operations.

Parameters:

operations

vector of operations to be added

const std::vector<std::pair<int, int> >& GetChainIntervalList ( )

inline

Get the list of intervals of chains.

Returns:

pair-intervals

Definition at line 296 of file mmcif_info.hh.

const std::vector<std::pair<int, int> >& GetChainIntervalList ( )

inline

Get the list of intervals of chains.

Returns:

pair-intervals

Definition at line 296 of file mmcif_info.hh.

const std::vector<String>& GetChainList ( ) const

inline

Get vector of chain names.

Returns:

chains

Definition at line 291 of file mmcif_info.hh.

const std::vector<String>& GetChainList ( ) const

inline

Get vector of chain names.

Returns:

chains

Definition at line 291 of file mmcif_info.hh.

String GetDetails ( ) const

inline

Get details.

Returns:

details

Definition at line 265 of file mmcif_info.hh.

String GetDetails ( ) const

inline

Get details.

Returns:

details

Definition at line 265 of file mmcif_info.hh.

String GetID ( ) const

inline

Get id.

Returns:

id

Definition at line 256 of file mmcif_info.hh.

String GetID ( ) const

inline

Get id.

Returns:

id

Definition at line 256 of file mmcif_info.hh.

String GetMethodDetails ( ) const

inline

Get method details.

Returns:

method details

Definition at line 276 of file mmcif_info.hh.

String GetMethodDetails ( ) const

inline

Get method details.

Returns:

method details

Definition at line 276 of file mmcif_info.hh.

const std::vector<std::vector<MMCifInfoTransOpPtr> >& GetOperations ( )

inline

Get the list of operations.

Returns:

vector of vectors of iterators.

Definition at line 317 of file mmcif_info.hh.

const std::vector<std::vector<MMCifInfoTransOpPtr> >& GetOperations ( )

inline

Get the list of operations.

Returns:

vector of vectors of iterators.

Definition at line 317 of file mmcif_info.hh.

const std::vector<std::pair<int, int> >& GetOperationsIntervalList ( )

inline

Get the list of intervals of operations.

Returns:

pair-intervals

Definition at line 309 of file mmcif_info.hh.

const std::vector<std::pair<int, int> >& GetOperationsIntervalList ( )

inline

Get the list of intervals of operations.

Returns:

pair-intervals

Definition at line 309 of file mmcif_info.hh.

void Merge

(

MMCifInfoBioUnit &

from

)

Merge chains & operations, set intervals.

Parameters:

from	biounit to read data from

void Merge

(

MMCifInfoBioUnit &

from

)

Merge chains & operations, set intervals.

Parameters:

from	biounit to read data from

bool operator!= ( const MMCifInfoBioUnit &  bu ) const

inline

Definition at line 367 of file mmcif_info.hh.

bool operator!= ( const MMCifInfoBioUnit &  bu ) const

inline

Definition at line 367 of file mmcif_info.hh.

bool operator== ( const MMCifInfoBioUnit &  bu ) const

inline

Definition at line 322 of file mmcif_info.hh.

bool operator== ( const MMCifInfoBioUnit &  bu ) const

inline

Definition at line 322 of file mmcif_info.hh.

void SetChainList

(

std::vector< String >

chains

)

Set a vector of chain names.

Parameters:

chains

chain name

void SetChainList

(

std::vector< String >

chains

)

Set a vector of chain names.

Parameters:

chains

chain name

void SetDetails ( String  details )

inline

Set details.

Parameters:

details

details

Definition at line 261 of file mmcif_info.hh.

void SetDetails ( String  details )

inline

Set details.

Parameters:

details

details

Definition at line 261 of file mmcif_info.hh.

void SetID ( String  id )

inline

Set id.

Parameters:

id

id

Definition at line 252 of file mmcif_info.hh.

void SetID ( String  id )

inline

Set id.

Parameters:

id

id

Definition at line 252 of file mmcif_info.hh.

void SetMethodDetails ( String  method_details )

inline

Set method details.

Parameters:

method

details

Definition at line 270 of file mmcif_info.hh.

void SetMethodDetails ( String  method_details )

inline

Set method details.

Parameters:

method

details

Definition at line 270 of file mmcif_info.hh.

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The documentation for this class was generated from the following files:

• stage/include/ost/io/mmcif_info.hh
• stage/include/ost/io/mol/mmcif_info.hh