OpenStructure
|
Public Member Functions | |
def | __init__ |
Data Fields | |
rmsd_common | |
tm_score | |
max_sub | |
gdt_ts | |
gdt_ha | |
rmsd_below_five | |
transform | |
Holds the result of running TMscore .. attribute:: rmsd_common The RMSD of the common Calpha atoms of both structures .. attribute:: rmsd_below_five The RMSD of all Calpha atoms that can be superposed below five Angstroem .. attribute:: tm_score The TM-score of the structural superposition .. attribute:: transform The transform that superposes the model onto the reference structure. :type: :class:`~ost.geom.Mat4` .. attribute:: gdt_ha The GDT_HA of the model to the reference structure. .. attribute:: gdt_ts The GDT_TS of the model to the reference structure.
Definition at line 175 of file tmtools.py.
def __init__ | ( | self, | |
rmsd_common, | |||
tm_score, | |||
max_sub, | |||
gdt_ts, | |||
gdt_ha, | |||
rmsd_below_five, | |||
transform | |||
) |
Definition at line 207 of file tmtools.py.
gdt_ha |
Definition at line 212 of file tmtools.py.
gdt_ts |
Definition at line 211 of file tmtools.py.
max_sub |
Definition at line 210 of file tmtools.py.
rmsd_below_five |
Definition at line 213 of file tmtools.py.
rmsd_common |
Definition at line 208 of file tmtools.py.
tm_score |
Definition at line 209 of file tmtools.py.
transform |
Definition at line 214 of file tmtools.py.