Public Member Functions | |
def | __init__ |
Data Fields | |
rmsd | |
tm_score | |
aligned_length | |
transform | |
ref_sequence | |
alignment |
Holds the result of running TMalign .. attribute:: rmsd The RMSD of the common Calpha atoms of both structures .. attribute:: transform The transform that superposes the model onto the reference structure. :type: :class:`~ost.geom.Mat4` .. attribute:: alignment The alignment of the structures, that is the pairing of Calphas of both structures. Since the programs only read ATOM records, residues consisting of HETATMs (MSE) are not included in the alignment. :type: :class:`~ost.seq.AlignmentHandle` .. attribute:: tm_score The TM-score of the structural superposition
Definition at line 54 of file tmtools.py.
def __init__ | ( | self, | ||
rmsd, | ||||
tm_score, | ||||
aligned_length, | ||||
transform, | ||||
ref_sequence, | ||||
alignment | ||||
) |
Definition at line 81 of file tmtools.py.
Definition at line 85 of file tmtools.py.
Definition at line 88 of file tmtools.py.
Definition at line 87 of file tmtools.py.
Definition at line 83 of file tmtools.py.
Definition at line 84 of file tmtools.py.
Definition at line 86 of file tmtools.py.