XCSEditor Class Reference

external coordinate system editor More...

#include <xcs_editor.hh>

Inherits ost::mol::EditorBase.

Public Member Functions

 XCSEditor ()
 ~XCSEditor ()
 XCSEditor (const XCSEditor &rhs)
XCSEditoroperator= (const XCSEditor &rhs)
void SetAtomOriginalPos (const AtomHandle &atom, const geom::Vec3 &position)
void SetAtomOriginalPos (const AtomHandleList &alist, float *positions)
void SetAtomOriginalPos (const AtomHandleList &alist, double *positions)
void SetAtomTransformedPos (const AtomHandle &atom, const geom::Vec3 &position)
void SetAtomTransformedPos (const AtomHandleList &alist, float *positions)
void SetAtomTransformedPos (const AtomHandleList &alist, double *positions)
void SetAtomPos (const AtomHandle &atom, const geom::Vec3 &position)
void SetAtomPos (const AtomHandleList &alist, float *positions)
void SetAtomPos (const AtomHandleList &alist, double *positions)
void ApplyTransform (const geom::Mat4 &transform)
void ApplyTransform (const geom::Transform &transform)
void SetTransform (const geom::Mat4 &transform)
void SetTransform (const geom::Transform &transform)
void FixTransform ()
void UpdateICS ()
void ForceUpdate ()

Protected Member Functions

 XCSEditor (const EntityHandle &ent, EditMode mode)
void Update ()

Friends

class EntityHandle

Detailed Description

external coordinate system editor

For an introduction to editors go here.

Definition at line 36 of file xcs_editor.hh.


Constructor & Destructor Documentation

XCSEditor (  ) 

create invalid xcs editor

~XCSEditor (  ) 
XCSEditor ( const XCSEditor rhs  ) 
XCSEditor ( const EntityHandle ent,
EditMode  mode 
) [protected]

Member Function Documentation

void ApplyTransform ( const geom::Transform transform  ) 
void ApplyTransform ( const geom::Mat4 transform  ) 

apply additional transformation to all atoms

This transformation is applied after the transformation already stored in the entity

void FixTransform (  ) 

set transformed pos to new original pos

void ForceUpdate (  ) 

force spatial organizer and ics update workaround for delayed dtor call from Python garbage collection

XCSEditor& operator= ( const XCSEditor rhs  ) 
void SetAtomOriginalPos ( const AtomHandleList alist,
double *  positions 
)

numpy double interface

the passed in double array must have a length of 3*alist.size()

void SetAtomOriginalPos ( const AtomHandleList alist,
float *  positions 
)

numpy float interface

the passed in float array must have a length of 3*alist.size()

void SetAtomOriginalPos ( const AtomHandle atom,
const geom::Vec3 position 
)

set original position of atom This function also updates the stores transformed coordinates

void SetAtomPos ( const AtomHandleList alist,
double *  positions 
)

same as SetTransformedPos(AtomHandleList,double*)

void SetAtomPos ( const AtomHandleList alist,
float *  positions 
)

same as SetTransformedPos(AtomHandleList,float*)

void SetAtomPos ( const AtomHandle atom,
const geom::Vec3 position 
)

same as SetAtomTransformedPos(AtomHandle, geom::Vec3)

void SetAtomTransformedPos ( const AtomHandleList alist,
double *  positions 
)

numpy double interface

the passed in double array must have a length of 3*alist.size()

void SetAtomTransformedPos ( const AtomHandleList alist,
float *  positions 
)

numpy float interface

the passed in float array must have a length of 3*alist.size()

void SetAtomTransformedPos ( const AtomHandle atom,
const geom::Vec3 position 
)

set transformed position of atom

This function also updates the original coordinates

void SetTransform ( const geom::Transform transform  ) 
void SetTransform ( const geom::Mat4 transform  ) 

apply a new transformation to all atoms

void Update (  )  [protected]
void UpdateICS (  ) 

immediately update internal coordinate system


Friends And Related Function Documentation

friend class EntityHandle [friend]

Definition at line 38 of file xcs_editor.hh.


The documentation for this class was generated from the following file:
 All Data Structures Namespaces Files Functions Variables Typedefs Enumerations Enumerator Properties Friends Defines

Generated on 10 Nov 2016 for OpenStructure by  doxygen 1.6.1