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__init__.py
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1 #------------------------------------------------------------------------------
2 # This file is part of the OpenStructure project <www.openstructure.org>
3 #
4 # Copyright (C) 2008-2011 by the OpenStructure authors
5 #
6 # This library is free software; you can redistribute it and/or modify it under
7 # the terms of the GNU Lesser General Public License as published by the Free
8 # Software Foundation; either version 3.0 of the License, or (at your option)
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13 # details.
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18 #------------------------------------------------------------------------------
19 from _ost_conop import *
20 
21 # The 20 standard amino acids in no particular order
22 STANDARD_AMINOACIDS=(
23  'ALA', 'ARG', 'ASN',
24  'ASP', 'GLN', 'GLU',
25  'LYS', 'SER', 'CYS',
26  'MET', 'TRP', 'TYR',
27  'THR', 'VAL', 'ILE',
28  'LEU', 'GLY', 'PRO',
29  'HIS', 'PHE',
30 )
31 
32 def SetDefaultLib(compound_lib):
33  '''
34  Set the default compound library. The compound library is used by various
35  functions of the framework that requires knowledge of naming and
36  connectivity of residues.
37  '''
38  conop_inst=Conopology.Instance()
39  conop_inst.SetDefaultLib(compound_lib)
40 
42  conop_inst=Conopology.Instance()
43  return conop_inst.GetDefaultLib()
44