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Class Hierarchy
This inheritance list is sorted roughly, but not completely, alphabetically:
[detail level 1234]
oC_fake_std_streams
oC_TestInfo
oC_XMLTestResult
oCAdditionalSettingsWidget
oCAdminRights
oCAlgorithmBaseAlgorithm base class
oCAlignedColumnProvides access to a column in a aligned region or a sequence alignment
oCAlignedCuboidAxis-aligned cuboid
oCAlignedPatch
oCAlignedRegionRegion in a sequence alignment
oCAlignmentContextMenu
oCAlignmentHandleRepresentation of a multiple sequence alignemnt consisting of two or more sequences
oCAlignmentOptsOptions for local and global sequence alignment algorithms
oCAminoAcidSetAmino acid bit set
oCAnisotropicFilter
oCAtomEntry
oCAtomGroup
oCAtomGroupEntry
oCAtomProp
oCAtomSpec
oCAutoCorrelateFnc
oCBackboneTrace
oCBaseRow
oCBaseViewObject
oCbinary_dispatch_ip< FNC >In-place binary dispatch
oCbinary_dispatch_op< FNC >Out-of-place binary dispatch
oCBinaryColExpr
oCBinaryDataSink
oCBinaryDataSource
oCBinaryIStream< CONVERSIONTYPE >
oCBinaryOStream< CONVERSIONTYPE >
oCBitmap
oCBlastError
oCBlastHit
oCBondEntry
oCBondSpec
oCBondTable< ATOM >
oCBondTableEntry< ATOM >
oCBuilderAbstract builder interface
oCByChainColorOpWidget
oCByChainGetCol
oCByChainWidget
oCByElementColorOpWidget
oCByElementGetCol
oCByElementWidget
oCByEntityWidget
oCCalculateSurfaceSettingsDialog
oCChainComboBox
oCChemClass
oCChemType
oCCircle2
oCClashingDistancesList of reference atom-atom distances to detect clashes between non-bonded atoms
oCClipWidget
oCColorColor with red, green, blue and alpha component
oCColorOp
oCColorOptionsWidget
oCColorSelectWidget
oCComboOptionsWidget
oCcomplexint16
oCcomplexint32_t
oCcomplexint8
oCCompoundKnows about the atoms and bonds of a chemical compounds
oCCompoundLib
oCConjFnc
oCConnResEntry
oCConopology
oCConstDataAbstract base class for read-only data
oCConstGenericPropContainer< H >
oCConstGenericPropContainer< AtomBase >
oCConstGenericPropContainer< BondHandle >
oCConstGenericPropContainer< ChainBase >
oCConstGenericPropContainer< ConstSequenceHandle >
oCConstGenericPropContainer< EntityBase >
oCConstGenericPropContainer< ResidueBase >
oCConstGenericPropContainer< SequenceHandle >
oCConstSequenceListList of immutable sequences
oCContextMenu
oCConvert< CONVERSIONTYPE, VALUETYPE >
oCCoordGroupHandleCoordinate group, for trajectories and such
oCCoordSourceCoordinate source
oCCosFnc
oCCPKWidget
oCCRDReaderCHARMM coordinate file import
oCCuboidArbitrary oriented bounding cuboid
oCCuboidAxisCuboid axis defined by a normalized direction vector and a half extent
oCCustomWidget
oCCylinderPrim
oCDatabaseSQLite database handle
oCDataObserverAbstract base class of data observer
oCDate
oCDihedralLow level dihedral implementation
oCDiscreteShrinkFncShrink image by integral amount
oCdivide_dimensions< D1, D2 >
oCDockWidget
oCDocWidget
oCDragTabBarTabbed drag widget
oCEdgeDesc
oCEditorBaseBase class for entity editors
oCEleImpl
oCEllipse2
oCEmptyMode
oCEntityIOHandlerPure abstract base class for entity io handlers
oCEntityIOHandlerFactoryBasePure abstract base class for creation of a specfic entity io handle
oCEntityObserver
oCEntityPropertyMapper
oCEntityRenderer
oCEntityViewGetCol
oCEntityViewVisitorEntityViewVisitor interface
oCEntityVisitorEntityVisitor interface
oCIndexedVertexArray::Entry
oCEnumOptBinder
oCError
oCEventButtonButton box
oCExpFnc
oCExplicitConvoluteFnc
oCExplicitCorrelateFnc
oCExporter
oCExportSceneDialog
oCExtentDefines lower and upper valid indices
oCExtentIteratorExtent iterator
oCFFTFnc
oCFileLoader
oCFileMenu
oCFileNotFound
oCFileTypeDialogDialog to select a file type
oCFileViewerSimplistic file viewer
oCFixedString< LENGTH >String class that uses an array of static size to hold the characters
oCFloatOptBinder
oCfnc_add_ip< T1, D1, T2, D2 >
oCfnc_div_ip< T1, D1, T2, D2 >
oCfnc_mul_ip< T1, D1, T2, D2 >
oCfnc_paste_ip< T1, D1, T2, D2 >
oCfnc_sub_ip< T1, D1, T2, D2 >
oCFormattedLine
oCFragmentImpl
oCFrequencyDomain
oCGaussianFilterBaseGaussian Filter
oCGaussianGradientMagnitudeFilterBaseFirst Derivative Gaussian Filter
oCGaussianLaplacianFilterBaseGaussian Filter
oCGDTResult
oCGenericPropContainerImplBase class for the implementation
oCGenericPropError
oCGenPropStruct to store info about GenericProperties parsed from the
oCGeomException
oCGfxNode
oCGfxNodeListAttrProxy
oCGfxNodeListProxy
oCGfxNodeVisitor
oCGfxView
oCGLWinBase
oCGostyApp
oCGradientColor gradient
oCGradientEdit
oCGradientEditor
oCGradientInfoHandler
oCGradientLevelColorOpWidget
oCGradientLevelGetCol
oCGradientListModel
oCGradientManager
oCGradientPresetWidget
oCGradientPreview
oCGutter
oCGutterBlock
oCHalfFrequencyDomain
oCHBond
oCHelp
oCHelpMenu
oCHHSearchHit
oCHHSearchResult
oCHighestPeakSearch3DBase
oCHistogramBase
oCHitSummary
oCHSCWidget
oCHyperbola2
oCImageFormatBase
oCImageListManages a collection of images
oCImageStateBase
oCImageStateConstModIPVisitorBaseIn-place modifying image state const visitor base class
oCImageStateConstModOPVisitorBaseOut-of-place modifying image state const visitor base class
oCImageStateModIPVisitorBaseIn-place modifying image state visitor base class
oCImageStateModOPVisitorBaseOut-of-place modifying image state visitor base class
oCImageStateMorphVisitorBaseMorphing image state visitor base class
oCImageStateNonModVisitorBaseNon-modifying image state visitor base class
oCImmutableGradientInfoHandler
oCImmutableLoaderInfoHandler
oCImmutablePresetInfoHandler
oCIndex
oCIndexedVertexArray
oCIndexIterator
oCInfoConstVisitor
oCInfoGroup
oCInfoHandleMain info handle
oCInfoImpl
oCInfoItem
oCInfoPanel
oCInfoPanelLabel
oCInfoPathEncapsulates path to info groups and items
oCInfoSet
oCInfoVisitor
oCInitMenuBar
oCInputEvent
oCInsDelGet insertions and deletions of an alignment
oCInspectorDialog
oCInspectorWidget
oCIntOptBinder
oCIOManagerCentral registry for input/output handlers
oCIOProfile
oCIOProfileRegistry
oCIOProfiles
oCIsosurfaceGenerator
oCIsosurfaceGeneratorS
oCiterator
oCIterRange< I >Adaptor to turn iterator into an iterator range
oCLevelPreview
oCLine2Line2
oCLine3Line3
oCLineAverageBaseComputes mean value of columns or lines
oCLineIteratorLine iterator generator
oCLineSlice
oCLineTraceWidget
oCLoaderEditWidget
oCLoaderInfoHandler
oCLoaderListModel
oCLoaderManager
oCLoaderManagerWidget
oCLocalSigmaThresholdBase
oCLog10Fnc
oCLogFnc
oCLogger
oCLogSink
oCLPaddedFloat
oCLPaddedInt
oCMAEReader
oCMainAreaMain window area It is implemented as a MDI (multi document interface). This allows you to add custom widgets to it
oCMainThreadRunner
oCManyOf
oCMapIOHandler
oCMapIOHandlerFactoryBase
oCMapLevelWidget
oCMapOctreeOctree datastructure for 3D images
oCMaskBase
oCMaskImageBase
oCMaskVisitor
oCMat2
oCMat3
oCMat4
oCMaterial
oCMeasurement
oCMessageBoxWidget
oCMessageLevel
oCMirrorFnc
oCMMAlignResult
oCMMCifInfoContainer class for additional information from MMCif files
oCMMCifInfoBioUnit
oCMMCifInfoCitation
oCMMCifInfoObsoleteContainer class for information on obsolete entries
oCMMCifInfoStructDetails
oCMMCifInfoStructRef
oCMMCifInfoStructRefSeq
oCMMCifInfoStructRefSeqDif
oCMMCifInfoTransOp
oCModelRepository
oCMouseEvent
oCMsmsProcessError
oCmultiply_dimensions< D1, D2 >
oCMyGradientStop
oCNode
oCNodeEntry
oCNormalizeFncAbstract normalizer base class
oCNormalizerImpl
oCIndexedVertexArray::NormalizerTriEntry
oCIndexedVertexArray::NormalizerVertexEntry
oCXMLTestRunnerTest.NullStream
oCObservable< T >Templated observable class
oCOcRangeVector
oCOctreeIsocontIsocontouring of maps using an octree-optimization
oCOctreeNode
oCOffscreenBuffer
oCOffscreenBufferFormat
oCOneOf
oCOpBase
oCOstCompleterBase
oCOstDirModel
oCOstOptionParser
oCOstOptionParser
oCOutputRedirector
oCOverlay
oCOverlayCustomActCheckBox
oCOverlayCustomLockCheckBox
oCOverlayCustomVisCheckBox
oCOverlayManager
oCOverlayManagerObserverAbstract observer base class for the OverlayManager
oCPainter
oCPairToTupleConverter< T1, T2 >Helper to convert between python tuple and std::pair
oCPanelBarWidgetHolder
oCPasteFnc
oCPDBReader
oCPDBWriter
oCPerspective
oCPhaseManages phases og Complex numbers
oCRasterImage::PixelSingle pixel spec
oCPixelSamplingHelper class to handle pixel sampling
oCPlane
oCPodVector< T >Vector container that treats its data as POD - even if it isn't in the strict sense
oCPointClass encapsulating 1D to 3D point
oCPointCloud
oCPointCloudManager
oCPointListList of points
oCPointlistOverlayBaseSettings
oCPolygon2
oCPooledWidget
oCPovState
oCPowerSpectrumFnc
oCPowFnc
oCPrebuildSphereEntry
oCPreparedStatement
oCPreset
oCPresetEditor
oCPresetEditorListModel
oCPresetInfoHandler
oCPresetListModel
oCPresetWidget
oCProfile
oCProgress
oCProp
oCPropertyError
oCPtrObserver< T >
oCPythonContext
oCPythonContextParser
oCPythonInterpreter
oCPythonInterpreterWorker
oCPythonShellTextDocumentLayout
oCPythonShellWidget
oCPythonSyntaxHighlighter
oCPythonToken
oCPythonTokenizer
oCQMainWindow
oCquantity< Dimensions >
oCquantity< detail::scalar_dimension >
oCQuatUnit quaternion
oCQuerySelection Query
oCQueryDialog
oCQueryEditorWidget
oCQueryError
oCQueryErrorDesc
oCQueryFlagQuery flags
oCQueryImplQuery statement implementation
oCQueryLexer
oCQueryStateHolds state used during query evaluation
oCQueryToken
oCQueryViewWrapper
oCRandomizeFnc
oCRange
oCRange
oCRangeHandler
oCRasterImageGeneric raster image
oCRectangle2
oCRefMode
oCRemoteSiteLoader
oCRenderModeWidget
oCRenderOp
oCRenderOptions
oCRenderOptionsWidget
oCRenderOpWidget
oCResNum
oCRingFinderClass for finding rings in an entity
oCRotation3
oCRowSet< R >Row set iterator
oCSceneMain class for organization and root for the graphical display
oCSceneMenu
oCSceneMenu
oCSceneNode
oCSceneObserverInterface for observing graphical objects
oCSceneSelection
oCSDFReader
oCSecStructureSecondary structure types as defined by DSSP. For convenience, the enum values match the characters used in the DSP file format
oCSecStructureSegmentConsecutive secondary structure element
oCSelection
oCSelectMenuPoints
oCSelectRefDialog
oCSelHelper
oCSelItem
oCSelStmt
oCSeqSearchBarSearch bar to search in multiple sequence alignment
oCSequenceDelegate
oCSequenceIOHandlerPure abstract base class for entity io handlers
oCSequenceIOHandlerFactoryBasePure abstract base class for creation of a specfic alignment io handler
oCSequenceListList of sequences
oCSequenceListImpl
oCSequenceModel
oCSequenceTableViewQTableView with first column not moving
oCSerializeHelper< false, T >
oCSerializeHelper< true, T >
oCSerializeWriteHelper< false, T >
oCSerializeWriteHelper< true, T >
oCShellHistory
oCShiftFnc
oCShowResultDialog
oCSimpleWidget
oCSinFnc
oCSizeClass encapsulating 1D to 3D size
oCSliceFnc
oCSlineWidget
oCSmoothMaskImageBase
oCSpacenavControl
oCSpatialDomain
oCSpatialOrganizer< ITEM, VEC >Spatial organizer
oCSphere
oCSpherePrim
oCSplashDialog
oCSpline
oCSplineEntry
oCSqrtFnc
oCStarDataItem
oCStarLoopDesc
oCStarParserParser for the STAR file format
oCStatAccumulator< MAX_MOMENT >
oCStatBase
oCState
oCStateMachine
oCStatMinMaxBase
oCStereoChemicalParamsList of stereo chemical parameters (Bonds and angles)
oCGradient::Stop
oCStringOrRegexParam
oCStringRefConvenient datatype for referencing character data
oCSubstWeightMatrixPosition-independet substitution weight matrix
oCSuperposerSVDEfficiently superpose a bunch of models with the same number of atoms Choose either two EntityViews or two AtomViewLists
oCSuperpositionDialog
oCSuperpositionResultStores the number of cycles and the two final EntityViews (in case IterativeSuperposition was applied), the root mean square deviation of the two superposed objects and the transformation matrix (geom::Mat4) to superpose input1 onto input2
oCSurfaceContextMenu
oCSurfaceHandle
oCSurfaceImpl
oCSurfaceIOHandler
oCSurfaceIOHandlerFactoryBase
oCSurfaceTri
oCSurfaceVertex
oCSymbolDrawingStrategy
oCSymmetryOp
oCTabbedDragWidgetTabbed drag widget
oCTable
oCTableCol
oCTanFnc
oCTempDirWithFiles
oCTerminalUsageDialog
oCTextLogger
oCTextPrim
oCTexture
oCThinSplitterSplitter with 1 pixel wide handles
oCtiff_warning_handler_wrapper
oCTMAlignResult
oCTMScoreResult
oCToolBase class for tools
oCToolBar
oCToolBarOptionsWidget
oCToolManager
oCToolOption
oCToolOptionGroup
oCToolOptionsTool options
oCToolOptionsWidget
oCConnResEntry::TorsionEntry
oCTorsionHandleNamed torsion (dihedral) angle
oCTraceProfileEntry
oCTraceWidget
oCTrajWidget
oCTransformBasic and essential transformation class, including translation, rotation and center of rotation
oCTransformationTransformation base class
oCTransformFnc
oCTransitionBase
oCTransitionGuard
oCTriMatrix< T >Triangular matrix template
oCTubeWidget
oCToolOptionEnum::Tuple
oCTwoOf
oCtypesStructure
oCtypesStructure
oCunary_dispatch_ip< FNC >In-place unary dispatch
oCunary_dispatch_op< FNC >Out-of-place unary dispatch
oCUniformColorOpWidget
oCUniformColorWidget
oCUniformGetCol
oCUniqueAtomIdentifierContains the infomation needed to uniquely identify an atom in a structure
oCUnits
oCValueHolder< V >
oCVec2
oCVec3Three dimensional vector class, using Real precision
oCVec3List
oCVec4
oCVectorAdditions< Container >
oCViewAddFlagFlags to control the behaviour when adding handles to views
oCViewport
oCVisibilityOp
oCVisibilityOpWidget
oCWidgetBase class for widgets
oCWidgetFactory
oCWidgetGeomHandler
oCWidgetPoolThis Widget pool manages instances of widgets Widgets can be added to this pool by simply passing the classname and the amount of available instances. This class is coupled to the WidgetRegistry
oCWidgetRegistryCentral registry for widgets
oCWidgetState
oCWidgetStateSaver< BASE, T1, T2, T3 >
oCWidgetStateSaver< BASE >
oCWidgetStateSaver< BASE, T1 >
oCWidgetStateSaver< BASE, T1, T2 >
oCWidgetStateSaverConfig
oCWindowMenu
oCWireframeWidget
oCWithinParam
oCXMLTestRunner
\CXMLTestRunnerTest