local_dist_diff_test.hh File Reference

#include <ost/mol/entity_view.hh>
#include <ost/mol/alg/module_config.hh>
#include <ost/seq/alignment_handle.hh>

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Data Structures
class	UniqueAtomIdentifier
	Contains the infomation needed to uniquely identify an atom in a structure. More...

Namespaces
namespace	ost
namespace	ost::mol
namespace	ost::mol::alg

Typedefs
typedef std::pair < UniqueAtomIdentifier, UniqueAtomIdentifier >	UAtomIdentifiers
typedef std::map< std::pair < UniqueAtomIdentifier, UniqueAtomIdentifier > , std::pair< Real, Real > >	ResidueRDMap
typedef std::map < ost::mol::ResNum, ResidueRDMap >	GlobalRDMap
typedef std::map < UniqueAtomIdentifier, int >	ExistenceMap

Functions
std::pair< long int, long int > DLLEXPORT_OST_MOL_ALG	LocalDistDiffTest (const EntityView &mdl, const GlobalRDMap &dist_list, std::vector< Real > cutoff_list, int sequence_separation=0, const String &local_ldt_property_string="")
Real DLLEXPORT_OST_MOL_ALG	LocalDistDiffTest (const EntityView &mdl, const EntityView &target, Real cutoff, Real max_dist, const String &local_ldt_property_string="")
Real DLLEXPORT_OST_MOL_ALG	LocalDistDiffTest (const ost::seq::AlignmentHandle &aln, Real cutoff, Real max_dist, int ref_index=0, int mdl_index=1)
Real DLLEXPORT_OST_MOL_ALG	LDDTHA (EntityView &v, const GlobalRDMap &global_dist_list, int sequence_separation=0)
GlobalRDMap	CreateDistanceList (const EntityView &ref, Real max_dist)
GlobalRDMap	CreateDistanceListFromMultipleReferences (const std::vector< EntityView > &ref_list, std::vector< Real > &cutoff_list, int sequence_separation, Real max_dist)
void	PrintGlobalRDMap (const GlobalRDMap &glob_dist_list)
void	PrintResidueRDMap (const ResidueRDMap &res_dist_list)
bool	IsStandardResidue (String rn)