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extract_data_helper.hh File Reference
#include <ost/geom/vec3.hh>
#include <ost/seq/sequence_handle.hh>
#include <ost/db/linear_indexer.hh>
#include <ost/db/binary_container.hh>
#include <ost/seq/alignment_handle.hh>

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Namespaces

 ost
 
 ost::db
 

Functions

void ExtractValidPositions (const String &entry_name, const String &chain_name, LinearIndexer &indexer, LinearCharacterContainer &atom_seqcontainer, LinearPositionContainer &position_container, ost::seq::SequenceHandle &seq, geom::Vec3List &positions)
 
void ExtractTemplateData (const String &entry_name, const String &chain_name, const ost::seq::AlignmentHandle &aln, LinearIndexer &indexer, LinearCharacterContainer &seqres_container, LinearCharacterContainer &atomseq_container, LinearPositionContainer &position_container, std::vector< int > &residue_numbers, geom::Vec3List &ca_positions)