Supported File Formats¶

Structure File Formats¶

The following file formats are supported by LoadEntity().

CRD - CARD format file used by CHARMM¶

This trajectory file format is used by the CHARMM program suite (Molecular Modelling).

Recognized File Extensions: crd

PDB - Brookhaven PDB File¶

Fine grained control over PDB file import is available via the LoadPDB() function. The PDB importer supports loading gzipped PDB files, which are auto-detected by the .gz file extension.

Recognized File Extensions: ent, pdb, ent.gz, pdb.gz
Format Name: pdb

PQR¶

Recognized File Extensions: pqr
Format Name: pqr

SDF - Structured Data File¶

Recognized File Extensions: sdf

Sequence File Formats¶

FASTA¶

Recognized File Extensions: fasta, fna, fas, fa, fsa
Format Name: fasta

ClustalW¶

Recognized File Extensions: aln
Format Name: clustal

Promod¶

Recognized File Extensions: ali
Format Name: promod

Contents

Documentation is available for the following OpenStructure versions:

dev / 2.7 / 2.6 / 2.5 / 2.4 / 2.3.1 / 2.3 / 2.2 / 2.1 / 2.0 / 1.9 / 1.8 / 1.7.1 / 1.7 / 1.6 / 1.5 / 1.4 / 1.3 / 1.2 / 1.11 / 1.10 / (Currently viewing 1.1)

This documentation is still under heavy development!
If something is missing or if you need the C++ API description in doxygen style, check our old documentation for further information.